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WIKI

Scaffold Software Tour

 

Scaffold Software

Extract more detailed and accurate information from your SEQUEST® or Mascot® results.

 

Discover how Scaffold Software helps you visually compare results across your entire experiment. These Flash demonstrations will show you how Scaffold lets you organize and share significant MS/MS data with clients and colleagues. You can also view a webinar.

Protein Display and Filtering
 Loading

Scaffold Software lets you manage large quantities of MS/MS data in a program that's easy to learn and easy to use.

Flash demo (1.7MB)
Demo w/o sound (0.8MB)
Data Evaluation
Samples

Improve your confidence in protein identification by combining X!Tandem's results with SEQUEST or Mascot.

Flash demo (1.4MB)
Demo w/o sound (0.4MB)
In-Depth Analysis
Protein

Cross-validating scores from different search engines produces higher coverage and fewer false positives.

Flash demo (1.2MB)
Demo w/o sound (0.5MB)
Free Scaffold Software
Publish

Downloading the free Scaffold Viewer is a simple way for collaborators and colleagues to view and maintain their MS/MS results.

Flash demo (2.6MB)
Demo w/o sound (1.2MB)
Focus On Key Proteins
Publish

Scaffold Version 1.6 has added features to help you focus your validation efforts on the proteins that matter to you.

Flash demo (2.6MB)
Demo w/o sound (1.2MB)

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Proteome Software Inc.



1-(800) 944-6027
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