Collaborators

These organizations work with Proteome Software to make Scaffold better.

In order to provide more complete solutions, Proteome Software has formed collaborations with several organizations in the proteomics and bioinformatics community. These collaborators have worked closely with Proteome Software to help us explore the field of proteomics in order to make our products better.

ProteoWizard Logo
  • The ProteoWizard Library and Tools are a set of modular and extensible open-source, cross-platform tools and software libraries that facilitate proteomics data analysis. The libraries enable rapid tool creation by providing a robust, pluggable development framework that simplifies and unifies data file access, and performs standard chemistry and LCMS dataset computations.
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  • Contact: by email
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Proteoin Metrics Logo
  • Protein Metrics Inc provides the Byonic™ search engine which gives highly sensitive and comprehensive protein identifications for all types of instruments, including for glycosylated and highly modified samples.
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  • Contact: by email
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IMP Logo
  • In the Mechtler lab, we are interested in developing new methods to increase the sensitivity, accuracy and precision of protein identification/quantification and the detection of post translational modifications. Our aim is to use these optimized methods to answer fundamental biological questions. Further we develop software for comprehensive data analysis: www.pd-nodes.org
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  • Contact: by email
  • Visit: their website
IMBA Logo
  • In the Mechtler lab, we are interested in developing new methods to increase the sensitivity, accuracy and precision of protein identification/quantification and the detection of post translational modifications. Our aim is to use these optimized methods to answer fundamental biological questions. Further we develop software for comprehensive data analysis: www.pd-nodes.org
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  • Contact: by email
  • Visit: their website
UC Davis Logo
  • The UC Davis Genome Center Proteomics Core Facility provides state-of-the-art analytical proteomic services, amino acid analysis and Edman sequencing.
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  • Contact: by email
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PacMass Logo
  • The Pacific Northwest Mass Spectrometry Group, PacMass, exists to provide a local forum for the free exchange of ideas and information concerning science, philosophy and technology as it relates to the discipline of mass spectrometry and related fields. PacMass members include scientists, students and corporate sponsors.
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  • Contact: by email
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MS Bioworks Logo
  • MS Bioworks is a state of the art protein mass spectrometry service provider delivering the highest quality data to Industrial and government organizations and academic institutions. Equipped with the latest technology and offering the latest in proteomic workflows MS Bioworks believes in developing long term relationships with our clients and partnering for our mutual success. Whether you are trying to identify a protein, discover new biomarkers or characterize the glycoforms of a therapeutic protein MS Bioworks can help.
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  • Contact: by email
  • Visit: their website