Discovery-based MS/MS Software

  • perSPECtives heat maps
    Global view of complex experimental changes

  • perSPECtives heat maps
    Track gene ontology and cellular function

  • perSPECtives heat maps
    Get better coverage and extra IDs

  • Kernel density function
    Track changes across sample groups

  • Advanced quantitative testing
    Determine up and down regulation

  • PTM analysis with Ascore
    Confident PTM localization

  • Attribute categorization
    Plan and organize your experiments

  • Detailed sequence coverage maps
    Dig deeper into your data

Scaffold has proven invaluable in helping explain experimental results to our clients from large proteomics experiments. The visualization tools make it easy for our clients to understand complex MS/MS comparative analyses.

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Matrix Science Mass Solutions Agilent Technologies Sierra Analytics Sagen Research Software4Labs Cloud Scientific Proteomic Solutions