Come see us at ABRF, US HUPO and ASMS this year. Scaffold, Q+ and Q+S have
been updated and released with many new features. Q+ and Q+S now support
iTRAQ and TMT data from MaxQuant. Additionally, TMT 10-plex and 8-plex are
supported as well as dimethyl quantitation from MaxQuant and Proteome Discoverer.
Come see us at HUPO in Japan, booth #42. Plus, we launched
a new product, perSPECtives, that allows flexible analysis and organization
of large-scale proteomics experiments, with robust, iterative filtering to
find proteins of interest. Adaptive differential expression coloring to
make changes pop.
Come see us at ASMS at booth #62. Plus, User's Group Meeting on
Sunday, June 9th, 2013, 230pm. Our flagship product, Scaffold 4 is stable at 4.0.5.
New FDR filtering, GO Term comparison by category, more robust statistics and
compatibility with MaxQuant label-free quantitation.
How to queue structured directories for easily loading
complex experiments that have multiple categories and biosamples;
ASMS presentation describing non-parametric statistical methods
used in Scaffold Q+ and Scaffold Q+S; User Group presentation
about Scaffold PTM 2.0 features such as global motif analysis,
quantification at modification sites and localization filtering;
Proteome Software is distributing Mascot Distiller in the USA;
Scaffold supports Spectrum Mill files; an early look at Scaffold 4.0;
Scaffold Suite feature comparison table
Create reverse FASTA databases; Mass QC is coming; journal
article on the importance of correct peptides and proteins in
complex mixtures; Scaffold Q+ is launched; downloading GOA database;