Scaffold DIA

Data-Independent Analysis of Proteomics Experiments

Scaffold DIA Screenshots
  • Turn-key program: go from raw data to reports using one program.
  • Normalize by protein levels and validate peptide assignments.
  • No need for RT calibration peptides.
  • Protein-centric analysis with FDR control.
  • Search raw data against FASTAs or other libraries.
  • Accurate quantitative values derived from fragment ion intensities.
  • Robust statistical analysis that accounts for complex experiments.
  • Intuitive graphical user interface (and CLI).